Ecological modeling, biogeography, and phenotypic analyses setting the tiger cats' hyperdimensional niches reveal a new species.

Recently, the tiger-cat species complex was split into Leopardus tigrinus and Leopardus guttulus, along with other proposed schemes. We performed a detailed analysis integrating ecological modeling, biogeography, and phenotype of the four originally recognized subspecies-tigrinus, oncilla, pardinoides, guttulus-and presented a new multidimensional niche depiction of the species. Species distribution models used > 1400 records from museums and photographs, all checked for species accuracy. Morphological data were obtained from institutional/personal archives. Spotting patterns were established by integrating museum and photographic/camera-trap records. Principal component analysis showed three clearly distinct groups, with the Central American specimens (oncilla) clustering entirely within those of the Andes, namely the pardinoides group of the cloud forests of the southern Central-American and Andean mountain chains (clouded tiger-cat); the tigrinus group of the savannas of the Guiana Shield and central/northeastern Brazil (savanna tiger-cat); and the guttulus group in the lowland forests of the Atlantic Forest domain (Atlantic Forest tiger-cat). This scheme is supported by recent genetic analyses. All species displayed different spotting patterns, with some significant differences in body measurements/proportions. The new distribution presented alarming reductions from the historic range of - 50.4% to - 68.2%. This multidimensional approach revealed a new species of the elusive and threatened tiger-cat complex.

Phylogeography, genetic diversity, and intraspecific genetic structure of the black-horned capuchin (Sapajus nigritus).

Recent molecular studies have clarified the overarching taxonomy of capuchin monkeys, but intraspecific genetic diversity remains unexplored for most capuchin species. One example is Sapajus nigritus, the southernmost capuchin monkey, found in Brazil and Argentina; its phenotypic diversity has been recognized as two geographic subspecies, but the intraspecific genetic structure of this taxon is poorly known. Here, we sampled across most of this species' geographic distribution, producing a newly sequenced data set for genetic analyses that included 78 individuals from 14 populations. We investigated the intraspecific diversity, genetic structure, and evolutionary history using three mitochondrial markers. Our results indicated that S. nigritus populations exhibited high levels of genetic structure. We found strong support for two monophyletic clades within this species with a deep phylogenetic split, and clear separation from other related taxa. Vicariance events seem to have played a prevalent role in shaping S. nigritus genetic differentiation. The Paraíba do Sul River may have driven the deep divergence between southern and northern clades, whereas the Tietê River may have had a weaker, more recent effect on the divergence of populations within the southern clade.

Verminotic pneumonia in South American fur seal (Arctocephalus australis) in Southern Brazil.

Verminotic pneumonia caused by Parafilaroides spp. nematodes is an underreported disease in beached South American fur seals, with scant literature available on the characteristics of parafilaroidiasis, the nematode itself, as well as its occurrence in pinnipeds in Brazil. The present work aims to identify, describe and detail the histological features of the infection and molecular characteristics of verminotic pneumonia in the South American fur seal. Twenty-six specimens of Arctocephalus australis, found dead on the northern coast of Rio Grande do Sul in 2021, were analysed. These animals were identified and submitted to necropsy and histology. For the molecular identification of metastrongylids, lung fragments were subjected to DNA extraction, polymerase chain reaction targeting the Internal transcribed spacer 2 (ITS-2) gene and subsequent sequencing. In total, 12 animals presented with parasites in the lung parenchyma on histological evaluation, and only 1 showed a granulomatous lung lesion at necropsy. Microscopically, the nematodes were found mainly in the alveoli, associated with little or no inflammatory response, and they had morphological characteristics compatible with metastrongylids. Six ITS-2 gene quality sequences were obtained; after comparative analysis via BLAST, they showed similarity with sequences obtained from Parafilaroides sp. Therefore, verminotic pneumonia caused by Parafilaroides represents an important differential diagnosis of lung disease in South American fur seals found on the northern coast of Rio Grande do Sul.

A Preliminary Assessment of the Potential Health and Genetic Impacts of Releasing Confiscated Passerines Into the Wild: A Reduced-Risk Approach.

The illegal capture and trade of wild birds have long been threats to biodiversity. The rehabilitation and release of confiscated animals may be a useful conservation tool in species management. However, differences between populations regarding health (e.g., different pathogens) and adaptation (e.g., local adaptation) must be taken into account, since both can negatively impact the recipient population. In this pilot study, we used two of the most illegally trafficked Brazilian wild passerine species, namely the red-crested cardinal (Paroaria coronata) and green-winged saltator (Saltator similis) as case studies and assessed some of the health threats that the release of confiscated passerines may pose to free-living birds. We also investigated the level of difference in mitochondrial genetic structure among populations living in different ecoregions. Blood, feces, and oropharyngeal swabs from confiscated (n = 115) and free-living (n = 120) passerines from the release sites were tested for the Newcastle disease virus, Salmonella spp., and Mycoplasma gallisepticum. These are considered major avian diseases by the Brazilian National Avian Health Program. We analyzed mtDNA to study the difference in genetic structure between populations using samples from 127 free-living passerines. We found no evidence of the Newcastle disease virus or Salmonella spp. in confiscated or free-living passerines from either species. However, the levels of infection with M. galissepticum detected in our study for red-crested cardinals and green-winged saltators calls for a high degree of caution in captive release programs. The difference in genetic structure between populations occurring in different regions was low, and was not significant between those from the Pampa/Subtropical Grasslands region. These results suggest that it may be possible to establish a cost-effective and sensitive protocol for releasing confiscated songbirds, provided that further genome-wide studies indicate that the functional genetic diversity among (at least some of the) populations is also low.

Análise da condição corpórea, biometria externa e das vísceras do trato gastrointestinal de canários-da-terra, Sicalis flaveola braziliensis / Analysis of body condition and external and gastrointestinal biometry of saffron finch, Sicalis flaveola braziliensis

Analisaram-se em canários-da-terra, Sicalis flaveola brasiliensis, apreendidos pelo Cetas-IBAMA/PB e que morreram logo após sua chegada, as medidas biométricas externas, condições corpóreas e de plumagem, medidas biométricas das vísceras do trato gastrointestinal (TGI), assim como a topografia visceral, a fim de fornecer dados morfológicos e caracterizar as condições em esses pássaros chegaram a esse centro de triagem. A topografia visceral estava em consonância com a de periquitos e avestruz, a exceção que essa última espécie apresenta um ceco. Verificou-se que há relação entre as condições corpóreas desfavoráveis e a perda de plumagem. Conclui-se, que S. flaveola braziliensis possui medidas biométricas em consonância á de outros Passeriformes, contudo possui divergências para aves do mesmo gênero e poucas diferenças biométricas entre machos e fêmeas. Através do estudo, verifica-se que as condições corpóreas de animais traficados devem ser consideradas nos centros de triagem, a fim de se fazer um melhor manejo nutricional e/ou clínico, diminuindo a mortalidade.

Forty-one saffron finch, Sicalis flaveola brasiliensis, were studied regarding the external biometry, corporeal and plumage conditions, gastrointestinal tract (GIT) biometry, and the visceral topography, in order to provide morphological data and to characterize the condition in which these birds came to the wild animal screening Center. The visceral topography was similar to the found in parakeets and ostriches; however the last have a cecum. There was also relationship between the unfavorable body conditions and the loss of feathers. It was concluded that S. flaveola braziliensis has biometric measurements similar to other Passeriformes, however with differences to birds of the same gender, and few biometric differences among males and females. The results demonstrate that the corporal conditions of trafficked animals should be considered in wild animal screening in order to perform a better nutritional and clinical management, and to lower mortality.

Ocorrência de anticorpos e fatores de risco associados à infecção por Leptospira spp. em Cebus spp. mantidos em cativeiro no Nordeste do Brasil / Occurrence of antibodies and risk factors associated with Leptospira spp. infection in capitivity Cebus spp. from Northeast of Brazil

Estudou-se a ocorrência de anticorpos anti-Leptospira e os fatores de risco associados à infecção em primatas do gênero Cebus mantidos em cativeiro no Nordeste do Brasil. Foram analisadas 139 amostras de soro sanguíneo de diferentes espécies de primatas de ambos os sexos e idades variadas. Para a pesquisa de anticorpos empregou-se a técnica de Soroaglutinação Microscópica (SAM) e para estudo dos fatores de risco utilizou-se análise multivariada. Foram observados anticorpos anti-Leptospira, sorovar Patoc em 6,5 por cento dos primatas (09/139). O fator de risco identificado nesse estudo foi a não higienização diária de bebedouros (Odds ratio=12,095; IC 95 por cento = 1,73-84,52; p=0,012,). Conclui-se que a população de Cebus mantidos em cativeiros no Nordeste do Brasil está exposta à infecção por anticorpos anti-Leptospira e que medidas corretivas de manejo dos animais, especificamente aquelas relacionadas à higienização diária de bebedouros devem ser implementadas para reduzir o risco de infecção por sorovares de Leptospira spp.

This study aimed to verify the occurrence of anti-Leptospira antibodies and the risk factors associated with infection in the Cebus spp. mantained in captivity in the northeast of Brazil. One hundred and thirty nine blood samples of different species of primates of both sexes and varied ages were analyzed. For the study of antibodies the Microscopic Agglutination Test (MAT) was used, and for the risk factor study a multivariate analysis was used. Antibodies anti-Leptospira, serovar Patoc were observed in 6.5 percent of primates (09/139). The risk factor identified in this study was the lack of daily hygienization of drinking fountains (Odds ratio=12.095; IC 95 percent = 1.73-84.52; p=0.012,). The conclusion of the study was that the Cebus population maintained in captivity in the northeast of Brazil is exposed to infection by antibodies anti-Leptospira and that corrective measures of animal handling, especially those related to daily hygienization of drinking fountains, must be implemented to reduce the risk of infection by serovars of Leptospira spp.

Ticks infesting wildlife species in northeastern Brazil with new host and locality records.

From September 2008 to March 2010, 397 ticks (315 larvae, 33 nymphs, 23 females, and 26 males) were collected from captive and free-living wildlife species in northeastern Brazil. Six tick species were identified, including Amblyomma auricularium (Conil) on Tamandua tetradactyla (L.), Amblyomma dubitatum Neumann on Hydrochaeris hydrochaeris (L.), Nectomys rattus (Pelzen) and T. tetradactyla, Amblyomma parvum Aragão on T. tetradactyla, Amblyomma rotundatum Koch on Boa constrictor L., Chelonoidis carbonaria (Spix), Kinosternon scorpioides (L.) and Rhinella jimi (Stevaux), Amblyomma oarium Koch on Bradypus variegatus Schinz, and Rhipicephalus sanguineus (Latreille) on Lycalopex vetulus (Lund). Nectomys rattus and T. tetradactyla are new hosts for A. dubitatum. This study extends the known distribution ofA. dubitatum in South America and provides evidence that its geographical range has been underestimated because of the lack of research. Four (A. dubitatum, A. parvum, A. rotundatum, and R. sanguineus) of six tick species identified in this study have previously been found on humans in South America, some of them being potentially involved in the transmission of pathogens of zoonotic concern.